Thanks, I ended up finding that the following command works for my case:
jackd -T -ndefault -dalsa -dhw:1,3
after doing aplay -l which gave
**** List of PLAYBACK Hardware Devices ****
card 0: PCH [HDA Intel PCH], device 0: CS4206 Analog [CS4206 Analog]
Subdevices: 1/1
Subdevice #0: subdevice #0
card 0: PCH [HDA Intel PCH], device 1: CS4206 Digital [CS4206 Digital]
Subdevices: 1/1
Subdevice #0: subdevice #0
card 1: HDMI [HDA ATI HDMI], device 3: HDMI 0 [HDMI 0]
Subdevices: 0/1
Subdevice #0: subdevice #0
and 1,3 is card 1, device 3